SMTL ID : 5yn2.1

Crystal structure of apo Pullulanase from Klebsiella pneumoniae in space group P43212

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: A.569, D.572, Y.574, D.912 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:A.569, A:D.572, A:Y.574, A:D.912, H2O.14 CA.2: 4 residues within 4Å: Chain A: D.500, L.501, E.506, E.587 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.500, A:L.501, A:E.506, A:E.587, H2O.4, H2O.11 CA.3: 5 residues within 4Å: Chain A: E.64, Q.67, D.167, T.169, D.181 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.167, A:D.167, A:T.169, A:D.181 CA.4: 5 residues within 4Å: Chain A: D.1013, S.1020, D.1022, V.1025, Q.1089 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.1013, A:S.1020, A:D.1022, A:V.1025, H2O.1

1 x MG: MAGNESIUM ION(Non-covalent)

MG.5: 3 residues within 4Å: Chain A: E.658, D.733, R.734 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Saka, N. et al., Elucidation of the mechanism of interaction between Klebsiella pneumoniae pullulanase and cyclodextrin. Acta Crystallogr D Struct Biol (2018)

Release Date

2018-10-24

Peptides

PulA protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PulA protein

Related Entries With Identical Sequence