SMTL ID : 5yow.1

The post-fusion structure of the Heartland virus Gc glycoprotein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-trimer

Ligands

3 x NAG- FUC- NAG- FUC: alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)][alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-FUC-NAG-FUC.1: 8 residues within 4Å: Chain A: Q.2, K.61, K.63, E.175, N.376, S.391, M.393, E.394 2 PLIP interactions: 2 interactions with chain A Water bridges: A:S.391, A:S.391, A:S.391 Hydrogen bonds: A:K.63, A:K.63 NAG-FUC-NAG-FUC.2: 8 residues within 4Å: Chain B: Q.2, K.61, K.63, E.175, N.376, S.391, M.393, E.394 2 PLIP interactions: 2 interactions with chain B Water bridges: B:S.391, B:S.391, B:S.391 Hydrogen bonds: B:K.63, B:K.63 NAG-FUC-NAG-FUC.3: 8 residues within 4Å: Chain C: Q.2, K.61, K.63, E.175, N.376, S.391, M.393, E.394 2 PLIP interactions: 2 interactions with chain C Water bridges: C:S.391, C:S.391, C:S.391 Hydrogen bonds: C:K.63, C:K.63

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, Y. et al., The Postfusion Structure of the Heartland Virus Gc Glycoprotein Supports Taxonomic Separation of the Bunyaviral Families Phenuiviridae and Hantaviridae. J. Virol. (2018)

Release Date

2017-11-22

Peptides

Glycoprotein polyprotein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Glycoprotein polyprotein