SMTL ID : 5yta.2 (1 other biounit)

Pig Heart Lactate Dehydrogenase in complex with NADH and Oxamate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 25 residues within 4Å: Chain A: G.29, Q.30, V.31, D.52, V.53, L.54, T.95, A.96, G.97, V.98, R.99, L.109, N.113, V.116, I.120, V.136, S.137, N.138, V.140, S.161, L.165, H.193, T.248, I.252 Ligands: OXM.2 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:V.31, A:I.252, A:I.252 Hydrogen bonds: A:V.28, A:Q.30, A:V.31, A:V.53, A:G.97, A:V.98, A:N.113, A:V.136, A:N.138 Water bridges: A:G.32, A:R.99, A:Q.100 Salt bridges: A:R.99, A:R.99

1 x OXM: OXAMIC ACID(Non-covalent)

OXM.2: 9 residues within 4Å: Chain A: Q.100, R.106, N.138, L.165, R.169, H.193, A.238, T.248 Ligands: NAD.1 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:Q.100, A:R.106, A:T.248, A:T.248, A:T.248 Water bridges: A:T.248 Salt bridges: A:R.106, A:R.169, A:H.193

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ho, M.C., pig heart lactate dehydrogenase in complex with NADH and oxamate. To Be Published

Release Date

2018-11-21

Peptides

L-lactate dehydrogenase B chain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

L-lactate dehydrogenase B chain

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