SMTL ID : 5ytx.1

Crystal structure of YB1 cold-shock domain in complex with UCAACU

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

1 x C- A- A- C: RNA (5'-R(P*UP*CP*AP*AP*CP*U)-3')(Non-covalent)

C-A-A-C.1: 12 residues within 4Å: Chain A: W.18, N.20, N.23, Y.25, F.27, D.36, F.38, H.40, T.42, K.71, G.72, A.73 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, X.J. et al., Crystal structure of a Y-box binding protein 1 (YB-1)-RNA complex reveals key features and residues interacting with RNA. J.Biol.Chem. (2019)

Release Date

2018-12-05

Peptides

Nuclease-sensitive element-binding protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nuclease-sensitive element-binding protein 1

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