- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.40 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x CA: CALCIUM ION(Non-functional Binders)
- 4 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
LMT.2: 13 residues within 4Å:- Chain A: I.131, M.134, M.178, T.179, M.213, I.214
- Chain C: L.180, F.207, T.210, F.211, I.214
- Ligands: LMT.8, LMT.11
3 PLIP interactions:1 interactions with chain C, 2 interactions with chain A- Hydrophobic interactions: C:F.211, A:I.131
- Hydrogen bonds: A:T.179
LMT.5: 13 residues within 4Å:- Chain B: I.131, M.134, M.178, T.179, M.213, I.214
- Chain D: L.180, F.207, T.210, F.211, I.214
- Ligands: LMT.8, LMT.11
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain D- Hydrophobic interactions: B:I.131, D:F.211
- Hydrogen bonds: B:T.179
LMT.8: 13 residues within 4Å:- Chain B: L.180, F.207, T.210, F.211, I.214
- Chain C: I.131, M.134, M.178, T.179, M.213, I.214
- Ligands: LMT.2, LMT.5
3 PLIP interactions:2 interactions with chain C, 1 interactions with chain B- Hydrophobic interactions: C:I.131, B:F.211
- Hydrogen bonds: C:T.179
LMT.11: 13 residues within 4Å:- Chain A: L.180, F.207, T.210, F.211, I.214
- Chain D: I.131, M.134, M.178, T.179, M.213, I.214
- Ligands: LMT.2, LMT.5
3 PLIP interactions:2 interactions with chain D, 1 interactions with chain A- Hydrophobic interactions: D:I.131, A:F.211
- Hydrogen bonds: D:T.179
- 4 x 1N7: CHAPSO(Non-covalent)
1N7.3: 6 residues within 4Å:- Chain A: Q.119
- Chain C: P.132, G.133, L.135, S.136, D.223
3 PLIP interactions:3 interactions with chain C- Hydrophobic interactions: C:L.135
- Hydrogen bonds: C:S.136, C:S.136
1N7.6: 6 residues within 4Å:- Chain B: Q.119
- Chain D: P.132, G.133, L.135, S.136, D.223
3 PLIP interactions:3 interactions with chain D- Hydrophobic interactions: D:L.135
- Hydrogen bonds: D:S.136, D:S.136
1N7.9: 6 residues within 4Å:- Chain B: P.132, G.133, L.135, S.136, D.223
- Chain C: Q.119
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:L.135
- Hydrogen bonds: B:S.136, B:S.136
1N7.12: 6 residues within 4Å:- Chain A: P.132, G.133, L.135, S.136, D.223
- Chain D: Q.119
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:L.135
- Hydrogen bonds: A:S.136, A:S.136
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Irie, K. et al., Structural insight on the voltage dependence of prokaryotic voltage gated sodium channel NavAb. FEBS Lett. (2017)
- Release Date
- 2017-12-27
- Peptides
- Ion transport protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.40 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x CA: CALCIUM ION(Non-functional Binders)
- 4 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
- 4 x 1N7: CHAPSO(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Irie, K. et al., Structural insight on the voltage dependence of prokaryotic voltage gated sodium channel NavAb. FEBS Lett. (2017)
- Release Date
- 2017-12-27
- Peptides
- Ion transport protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A - Membrane
-
We predict this structure to be a membrane protein.