SMTL ID : 5yug.2 (1 other biounit)

AtVAL1 PHD-Like domain in the P31 space group

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.57 Å

Oligo State

homo-dimer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.52, H.56, H.73, C.76 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.52, A:H.56, A:H.73, A:C.76 ZN.2: 4 residues within 4Å: Chain A: C.65, C.68, C.93, C.96 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.65, A:C.68, A:C.93, A:C.96 ZN.3: 4 residues within 4Å: Chain A: C.11, C.16, C.39, C.42 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.11, A:C.16, A:C.39, A:C.42 ZN.5: 4 residues within 4Å: Chain B: C.52, H.56, H.73, C.76 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.52, B:H.56, B:H.73, B:C.76 ZN.6: 5 residues within 4Å: Chain B: C.65, C.68, C.93, T.95, C.96 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.65, B:C.68, B:C.93, B:C.96 ZN.7: 4 residues within 4Å: Chain B: C.11, C.16, C.39, C.42 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.11, B:C.16, B:C.39, B:C.42

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 10 residues within 4Å: Chain A: Y.46, S.49, L.50, F.51, C.52, E.53, A.78, S.79, V.81, T.82 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.46, A:F.51, A:C.52, A:E.53, A:E.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, M.M. et al., AtVAL1 PHD-Like domain in the P31 space group. To Be Published

Release Date

2018-05-02

Peptides

B3 domain-containing transcription repressor VAL1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
E

B3 domain-containing transcription repressor VAL1

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