SMTL ID : 5yvn.1

Human Glutathione Transferase Omega1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.33 Å

Oligo State

homo-dimer

Ligands

2 x GSH: GLUTATHIONE(Non-covalent)

GSH.1: 10 residues within 4Å: Chain A: C.32, P.33, F.34, L.56, K.59, L.71, V.72, P.73, E.85, S.86 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.34, A:L.71 Hydrogen bonds: A:V.72, A:V.72, A:E.85, A:S.86 Water bridges: A:R.37, A:K.59, A:E.85, A:A.87, A:Y.229 Salt bridges: A:K.59 GSH.6: 10 residues within 4Å: Chain B: C.32, P.33, F.34, L.56, K.59, L.71, V.72, P.73, E.85, S.86 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:F.34, B:L.71 Hydrogen bonds: B:V.72, B:V.72, B:E.85, B:S.86 Water bridges: B:R.37, B:K.59, B:E.85, B:A.87, B:Y.229 Salt bridges: B:K.59

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: R.39, H.49, V.51, L.215 5 PLIP interactions: 5 interactions with chain A Water bridges: A:R.39, A:R.39, A:K.43 Salt bridges: A:R.39, A:H.49 SO4.3: 3 residues within 4Å: Chain A: E.21, G.22, S.78 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.22, A:S.78, A:S.78 Water bridges: A:S.78, A:S.78, A:Y.97 SO4.4: 2 residues within 4Å: Chain A: R.30, R.39 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.30 Water bridges: A:R.39, A:R.39, A:R.39 SO4.7: 4 residues within 4Å: Chain B: R.39, H.49, V.51, L.215 5 PLIP interactions: 5 interactions with chain B Water bridges: B:R.39, B:R.39, B:K.43 Salt bridges: B:R.39, B:H.49 SO4.8: 3 residues within 4Å: Chain B: E.21, G.22, S.78 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.22, B:S.78, B:S.78 Water bridges: B:S.78, B:S.78 SO4.9: 2 residues within 4Å: Chain B: R.30, R.39 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.30 Water bridges: B:R.39, B:R.39, B:R.39

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.5: 6 residues within 4Å: Chain A: E.91, L.103, Q.113, K.114, L.117, L.176 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Q.113, A:L.176 Hydrogen bonds: A:E.91 Salt bridges: A:K.114 ACT.10: 6 residues within 4Å: Chain B: E.91, L.103, Q.113, K.114, L.117, L.176 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:Q.113, B:L.176 Salt bridges: B:K.114

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Saisawang, C. et al., Glutathione transferase Omega 1-1 (GSTO1-1) modulates Akt and MEK1/2 signaling in human neuroblastoma cell SH-SY5Y. Proteins (2019)

Release Date

2018-11-28

Peptides

Glutathione S-transferase omega-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Glutathione S-transferase omega-1

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