SMTL ID : 5ywi.1

Crystal structure of Arabidopsis thaliana HPPD Truncated mutant complexed with NTBC

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.58 Å

Oligo State

homo-dimer

Ligands

2 x CO: COBALT (II) ION(Non-covalent)

CO.1: 4 residues within 4Å: Chain A: H.195, H.277, E.363 Ligands: NTD.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.195, A:H.277, A:E.363 CO.3: 4 residues within 4Å: Chain B: H.195, H.277, E.363 Ligands: NTD.4 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.195, B:H.277, B:E.363

2 x NTD: 2-{HYDROXY[2-NITRO-4-(TRIFLUOROMETHYL)PHENYL]METHYLENE}CYCLOHEXANE-1,3-DIONE(Non-covalent)

NTD.2: 17 residues within 4Å: Chain A: H.195, V.197, S.236, P.249, Q.276, H.277, L.337, Q.348, F.350, F.361, E.363, F.388, G.389, N.392, F.393, L.396 Ligands: CO.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.197, A:P.249, A:F.350, A:F.350 pi-Stacking: A:F.393 NTD.4: 17 residues within 4Å: Chain B: H.195, V.197, S.236, P.249, Q.276, H.277, L.337, Q.348, F.350, F.361, E.363, F.388, G.389, N.392, F.393, L.396 Ligands: CO.3 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:V.197, B:P.249, B:F.350, B:F.350 pi-Stacking: B:F.393

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, W.C. et al., Crystal structure of Arabidopsis thaliana HPPD Truncated mutant complexed with NTBC. To be published

Release Date

2019-01-16

Peptides

4-hydroxyphenylpyruvate dioxygenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

4-hydroxyphenylpyruvate dioxygenase