SMTL ID : 5yxf.1

Mycobacterium Tuberculosis Methionine aminopeptidase type 1c (C105L mutant) in complex with Methionine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.61 Å

Oligo State

monomer

Ligands

2 x CO: COBALT (II) ION(Non-covalent)

CO.1: 7 residues within 4Å: Chain A: D.176, H.239, T.270, E.272, E.303 Ligands: CO.2, MET.4 5 PLIP interactions: 1 Ligand-Ligand interactions, 4 interactions with chain A Metal complexes: MET.4, A:D.176, A:H.239, A:E.272, A:E.303 CO.2: 6 residues within 4Å: Chain A: D.165, T.167, D.176, E.303 Ligands: CO.1, MET.4 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.165, A:D.165, A:D.176, A:E.303

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 4 residues within 4Å: Chain A: L.142, N.143, V.145, T.299 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.142, A:T.299

1 x MET: METHIONINE(Non-covalent)

MET.4: 14 residues within 4Å: Chain A: Y.131, L.139, H.148, D.165, T.167, D.176, H.239, F.245, H.246, E.272, W.289, E.303 Ligands: CO.1, CO.2 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.139, A:F.245 Hydrogen bonds: A:T.167 Salt bridges: A:H.239, A:H.246

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sandeep, C.B. et al., Mycobacterium Tuberculosis Methionine aminopeptidase type 1c (C105L mutant) in complex with Methionine. To Be Published

Release Date

2018-12-12

Peptides

Methionine aminopeptidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Methionine aminopeptidase