SMTL ID : 5yya.1

Crystal structure of Tandem Tudor Domain of human UHRF1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 8 residues within 4Å: Chain A: D.21, W.30, F.31, E.32, A.87, M.103, W.117 Ligands: EDO.2 2 PLIP interactions: 2 interactions with chain A Water bridges: A:E.32, A:W.117 EDO.2: 3 residues within 4Å: Chain A: W.117, F.157 Ligands: EDO.1 1 PLIP interactions: 1 interactions with chain A Water bridges: A:D.21 EDO.3: 5 residues within 4Å: Chain A: D.24, M.27, F.31, Y.70, N.73 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.24, A:N.73

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 3 residues within 4Å: Chain A: N.105, R.114, W.117 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.105, A:W.117 Water bridges: A:R.114 Salt bridges: A:R.114

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kori, S. et al., Structure of the UHRF1 Tandem Tudor Domain Bound to a Methylated Non-histone Protein, LIG1, Reveals Rules for Binding and Regulation. Structure (2019)

Release Date

2018-12-12

Peptides

E3 ubiquitin-protein ligase UHRF1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E3 ubiquitin-protein ligase UHRF1