SMTL ID : 5yyp.1

Structure K137A thaumatin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.01 Å

Oligo State

monomer

Ligands

1 x TLA: L(+)-TARTARIC ACID(Non-covalent)

TLA.1: 4 residues within 4Å: Chain A: F.152, T.154, Y.157, Y.169 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.157 Water bridges: A:F.152

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: G.47, E.89, F.90, S.91, Y.99, I.100, D.101, T.190 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.47, A:D.101, A:D.101 Water bridges: A:N.46 GOL.3: 2 residues within 4Å: Chain A: Y.11, T.54 No protein-ligand interaction detected (PLIP) GOL.4: 10 residues within 4Å: Chain A: I.105, D.147, A.148, C.149, Y.157, Y.169, S.170, F.173, S.182, Y.183 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:I.105, A:D.147, A:A.148, A:C.149, A:Y.157 Water bridges: A:V.184

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Masuda, T. et al., Positive Charges on the Surface of Thaumatin Are Crucial for the Multi-Point Interaction with the Sweet Receptor. Front Mol Biosci (2018)

Release Date

2018-03-21

Peptides

Preprothaumatin I: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Preprothaumatin I