SMTL ID : 5yzp.1

Crystal structure of p204 HINa domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.58 Å

Oligo State

monomer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 1 residues within 4Å: Chain A: H.36 No protein-ligand interaction detected (PLIP) EDO.2: 7 residues within 4Å: Chain A: K.56, C.179, H.181, G.194, E.195, H.196, S.197 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.194, A:H.196 Water bridges: A:E.195 EDO.4: 4 residues within 4Å: Chain A: P.17, L.18, T.19, I.73 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.19, A:T.19

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 4 residues within 4Å: Chain A: L.18, T.48, S.50, Q.51 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.18

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fan, X. et al., Structural mechanism of DNA recognition by the p204 HIN domain. Nucleic Acids Res. (2021)

Release Date

2018-12-19

Peptides

Ifi204: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ifi204