SMTL ID : 5z2v.1

Crystal structure of RecR from Pseudomonas aeruginosa PAO1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.57, C.60, C.69, C.72 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.57, A:C.60, A:C.69, A:C.72 ZN.5: 4 residues within 4Å: Chain B: C.57, C.60, C.69, C.72 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.57, B:C.60, B:C.69, B:C.72

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: G.55, H.56, R.61 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.56, A:R.61 GOL.3: 8 residues within 4Å: Chain A: H.56, R.61, E.86, G.87, P.88, V.105, L.106, K.107 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.61, A:E.86 Water bridges: A:K.107

1 x N: ANY 5'-MONOPHOSPHATE NUCLEOTIDE(Non-covalent)

N.4: 5 residues within 4Å: Chain A: E.149, H.153, R.168, H.171, H.189 6 PLIP interactions: 6 interactions with chain A Water bridges: A:E.149, A:H.171, A:H.171, A:R.195 Salt bridges: A:H.153, A:H.171

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.6: 2 residues within 4Å: Chain B: A.170, R.195 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.195

1 x NA: SODIUM ION(Non-functional Binders)

NA.7: 2 residues within 4Å: Chain B: H.171, H.189 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:H.171

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Che, S. et al., Crystal structure of RecR, a member of the RecFOR DNA-repair pathway, from Pseudomonas aeruginosa PAO1. Acta Crystallogr F Struct Biol Commun (2018)

Release Date

2019-01-02

Peptides

Recombination protein RecR: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Recombination protein RecR