SMTL ID : 5z6h.2 (1 other biounit)

Structure of periplasmic trehalase from Diamondback moth gut bacteria in the apo form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: H.181, W.182, D.183, K.184 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.183, A:K.184 Water bridges: A:W.182, A:W.182, A:K.184 Salt bridges: A:H.181, A:K.184 SO4.2: 5 residues within 4Å: Chain A: Y.247, D.250, K.262, R.263, D.279 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.250, A:D.250 Water bridges: A:H.201, A:K.262, A:K.262, A:D.279 Salt bridges: A:R.263 SO4.3: 3 residues within 4Å: Chain A: R.405, N.406, Q.407 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.406, A:N.406, A:Q.407 Water bridges: A:R.405, A:R.405 Salt bridges: A:R.405 SO4.4: 3 residues within 4Å: Chain A: K.350, K.353, R.357 7 PLIP interactions: 7 interactions with chain A Water bridges: A:K.350, A:K.353, A:R.357 Salt bridges: A:K.350, A:K.353, A:R.357, A:K.419

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 8 residues within 4Å: Chain A: N.204, Y.210, R.213, Q.215, R.284, E.286, A.314, D.319 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.204, A:R.213, A:Q.215, A:R.284, A:E.286, A:E.286 Water bridges: A:D.319, A:D.319

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Adhav, A. et al., Mechanistic insights into enzymatic catalysis by trehalase from the insect gut endosymbiont Enterobacter cloacae. Febs J. (2019)

Release Date

2019-01-23

Peptides

Periplasmic trehalase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Periplasmic trehalase

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