SMTL ID : 5z6l.1

High-pressure Crystal Structure Analysis of M20 loop closed DHFR at 650 MPa

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x FOL: FOLIC ACID(Non-covalent)

FOL.1: 12 residues within 4Å: Chain A: I.8, A.9, A.10, M.23, D.30, L.31, F.34, K.35, P.58, R.60, I.97 Ligands: NAP.2 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:I.8, A:A.10, A:D.30, A:I.97, A:Y.103 Water bridges: A:R.60, A:T.116 Salt bridges: A:D.30, A:K.35, A:R.60

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.2: 27 residues within 4Å: Chain A: A.9, A.10, I.17, G.18, M.19, N.21, A.22, G.46, R.47, H.48, T.49, L.65, S.66, S.67, Q.68, K.79, V.81, I.97, G.98, G.99, G.100, R.101, V.102, Y.103, Q.105, T.126 Ligands: FOL.1 28 PLIP interactions: 28 interactions with chain A Hydrophobic interactions: A:T.49, A:Y.103 Hydrogen bonds: A:A.10, A:A.10, A:N.21, A:N.21, A:G.46, A:R.47, A:H.48, A:T.49, A:S.66, A:S.67, A:Q.68, A:V.81, A:G.98, A:G.99, A:G.100, A:R.101, A:R.101, A:V.102, A:Q.105, A:Q.105, A:T.126, A:T.126 Water bridges: A:T.126 Salt bridges: A:R.47, A:H.48, A:H.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nagae, T. et al., High-pressure protein crystal structure analysis of Escherichia coli dihydrofolate reductase complexed with folate and NADP. Acta Crystallogr D Struct Biol (2018)

Release Date

2018-09-19

Peptides

Dihydrofolate reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dihydrofolate reductase

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