SMTL ID : 5z6t.1 (1 other biounit)

Crystal structure of D-xylose reductase from Scheffersomyces stipitis in complex with NADPH

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 27 residues within 4Å: Chain A: G.43, C.44, W.45, D.68, Y.73, K.102, H.135, S.190, N.191, Q.212, Y.238, S.239, S.240, F.241, Q.244, S.245, E.248, F.261, A.278, I.293, P.294, K.295, N.297, R.301, E.304, N.305, N.331 31 PLIP interactions: 31 interactions with chain A Hydrophobic interactions: A:W.45, A:Y.238, A:Y.238, A:Y.238 Hydrogen bonds: A:C.44, A:W.45, A:D.68, A:S.190, A:N.191, A:N.191, A:Q.212, A:S.239, A:F.241, A:Q.244, A:S.245, A:S.245, A:K.295, A:K.295, A:K.295, A:N.297, A:E.304, A:N.305, A:N.331 Water bridges: A:S.240, A:S.240, A:S.245, A:S.245, A:S.276, A:R.301 Salt bridges: A:R.301 pi-Cation interactions: A:R.301

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Son, H.F. et al., Structural insight intoD-xylose utilization by xylose reductase from Scheffersomyces stipitis. Sci Rep (2018)

Release Date

2018-12-05

Peptides

NAD(P)H-dependent D-xylose reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

NAD(P)H-dependent D-xylose reductase

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