SMTL ID : 5z7l.1

Crystal structure of NDP52 SKICH region in complex with NAP1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.02 Å

Oligo State

hetero-2-2-mer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: S.18, E.20, Y.23, T.30, H.32 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.18 Water bridges: A:Y.23, A:T.30 GOL.2: 3 residues within 4Å: Chain B: I.15, T.34, T.36 No protein-ligand interaction detected (PLIP) GOL.3: 2 residues within 4Å: Chain B: R.42, E.103 1 PLIP interactions: 1 interactions with chain B Water bridges: B:K.44 GOL.4: 1 residues within 4Å: Chain B: Y.87 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fu, T. et al., Mechanistic insights into the interactions of NAP1 with the SKICH domains of NDP52 and TAX1BP1. Proc. Natl. Acad. Sci. U.S.A. (2018)

Release Date

2019-01-02

Peptides

Calcium-binding and coiled-coil domain-containing protein 2: AB
5-azacytidine-induced protein 2: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Calcium-binding and coiled-coil domain-containing protein 2

5-azacytidine-induced protein 2

Related Entries With Identical Sequence