SMTL ID : 5z7z.1 (1 other biounit)

Crystal structure of Striga hermonthica Dwarf14 (ShD14)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

monomer

Ligands

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 4 residues within 4Å: Chain A: Q.41, R.178, E.179, R.182 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.178, A:R.182 Water bridges: A:S.38, A:R.182 PEG.2: 4 residues within 4Å: Chain A: I.146, V.149, F.164, S.196 No protein-ligand interaction detected (PLIP)

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 2 residues within 4Å: Chain A: K.235, E.236 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.235, A:K.235, A:E.236

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 4 residues within 4Å: Chain A: T.75, R.197, M.198, N.201 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.75, A:N.201 EDO.5: 4 residues within 4Å: Chain A: S.229, A.232, Y.233, E.236 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.236

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, Y. et al., Structural analysis of HTL and D14 proteins reveals the basis for ligand selectivity in Striga. Nat Commun (2018)

Release Date

2018-08-29

Peptides

Dwarf 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dwarf 14

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