SMTL ID : 5z88.1

Crystal structure of H5 hemagglutinin G228S mutant with 3SLN from A/chicken/Taiwan/0502/2012

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-trimer

Ligands

3 x GAL- SIA: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose(Non-covalent)

GAL-SIA.1: 14 residues within 4Å: Chain A: Y.132, S.170, G.171, V.172, S.173, S.174, W.190, H.220, N.223, E.227, K.230, L.231, Q.263, S.265 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:N.223, A:Q.263, A:Y.132, A:V.172, A:S.174, A:E.227, A:K.230, A:K.230, A:Q.263, A:Q.263, A:S.265 GAL-SIA.2: 14 residues within 4Å: Chain B: Y.132, S.170, G.171, V.172, S.173, S.174, W.190, H.220, N.223, E.227, K.230, L.231, Q.263, S.265 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:N.223, B:Q.263, B:Y.132, B:V.172, B:S.174, B:E.227, B:K.230, B:K.230, B:Q.263, B:Q.263, B:S.265 GAL-SIA.3: 14 residues within 4Å: Chain C: Y.132, S.170, G.171, V.172, S.173, S.174, W.190, H.220, N.223, E.227, K.230, L.231, Q.263, S.265 9 PLIP interactions: 9 interactions with chain C Hydrogen bonds: C:N.223, C:Q.263, C:Y.132, C:V.172, C:S.174, C:E.227, C:K.230, C:K.230, C:Q.263, C:Q.263, C:S.265

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, T.H. et al., crystal structure of H5 hemagglutinin from A/chicken/Taiwan/0502/2012. To Be Published

Release Date

2019-02-06

Peptides

Hemagglutinin: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Hemagglutinin

Related Entries With Identical Sequence