SMTL ID : 5zbh.1

The Crystal Structure of Human Neuropeptide Y Y1 Receptor with BMS-193885

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x 9AF: dimethyl 4-{3-[({3-[4-(3-methoxyphenyl)piperidin-1-yl]propyl}carbamoyl)amino]phenyl}-2,6-dimethyl-1,4-dihydropyridine-3,5-dicarboxylate(Non-covalent)

9AF.1: 23 residues within 4Å: Chain A: P.126, Q.129, C.130, I.133, T.134, F.182, D.209, T.221, L.224, Q.228, Y.229, W.437, L.440, T.441, F.443, N.444, T.445, F.447, D.448, A.455, H.459, N.460, F.463 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:I.133, A:F.182, A:T.221, A:Y.229, A:W.437, A:L.440, A:T.441, A:F.443, A:N.444, A:T.445, A:A.455, A:F.463 Hydrogen bonds: A:Q.129, A:T.221, A:T.441, A:N.444, A:D.448, A:D.448 Salt bridges: A:D.209 pi-Stacking: A:F.443

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, Z. et al., Structural basis of ligand binding modes at the neuropeptide Y Y1receptor. Nature (2018)

Release Date

2018-04-25

Peptides

Neuropeptide Y receptor type 1,T4 Lysozyme,Neuropeptide Y receptor type 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Neuropeptide Y receptor type 1,T4 Lysozyme,Neuropeptide Y receptor type 1