SMTL ID : 5zbz.1

Crystal structure of the DEAD domain of Human eIF4A with sanguinarine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.31 Å

Oligo State

monomer

Ligands

1 x SAU: 13-methyl[1,3]benzodioxolo[5,6-c][1,3]dioxolo[4,5-i]phenanthridin-13-ium(Non-covalent)

SAU.1: 9 residues within 4Å: Chain A: Y.32, F.34, S.60, G.61, T.62, G.63, Q.97, V.101 Ligands: MLI.2 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.34, A:Q.97 Hydrogen bonds: A:G.63 Water bridges: A:Q.97

1 x MLI: MALONATE ION(Non-functional Binders)

MLI.2: 9 residues within 4Å: Chain A: S.60, G.61, T.62, G.63, K.64, T.65, A.66, Q.97 Ligands: SAU.1 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:G.61, A:T.62, A:T.62, A:G.63, A:T.65, A:T.65, A:Q.97 Water bridges: A:A.66, A:E.165

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jiang, C. et al., Targeting the N Terminus of eIF4AI for Inhibition of Its Catalytic Recycling. Cell Chem Biol (2019)

Release Date

2019-02-20

Peptides

Eukaryotic initiation factor 4A-I: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Eukaryotic initiation factor 4A-I