SMTL ID : 5zdl.1

Crystal Structure Analysis of TtQRS in co-crystallised with ATP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 13 residues within 4Å: Chain A: F.29, P.30, P.31, E.32, H.38, G.40, H.41, R.43, S.44, C.222, T.223, R.259, L.260 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.32, A:T.223, A:L.260, A:L.260 Salt bridges: A:H.41, A:H.41

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: R.409, R.411, H.412, V.453 Ligand excluded by PLIP CL.3: 2 residues within 4Å: Chain A: P.367, R.368 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain A: R.251, H.253 Ligand excluded by PLIP CL.5: 2 residues within 4Å: Chain A: G.357, R.460 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nachiappan, M. et al., Structural and functional analysis of Glutaminyl-tRNA synthetase (TtGlnRS) from Thermus thermophilus HB8 and its complexes. Int. J. Biol. Macromol. (2018)

Release Date

2018-12-05

Peptides

Glutamine--tRNA ligase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glutamine--tRNA ligase

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