SMTL ID : 5zec.1 (1 other biounit)

Crystal structure of Kluyveromyces polyspora ADH (KpADH) mutant (Q136N/F161V/S196G/E214G/S237C)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

monomer

Ligands

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 29 residues within 4Å: Chain A: G.7, S.9, G.10, Y.11, I.12, R.32, K.36, V.54, P.55, E.56, I.57, A.80, A.81, S.82, P.83, V.84, P.98, T.124, A.125, S.126, Y.127, Y.164, K.168, P.195, G.196, F.197, V.198, T.215 Ligands: EDO.3 30 PLIP interactions: 30 interactions with chain A Hydrophobic interactions: A:P.195, A:V.198 Hydrogen bonds: A:S.9, A:S.9, A:S.9, A:Y.11, A:I.12, A:R.32, A:R.32, A:E.56, A:I.57, A:A.80, A:S.82, A:K.168, A:V.198, A:T.215 Water bridges: A:G.7, A:G.7, A:S.9, A:K.36, A:K.36, A:K.36, A:K.36, A:N.85, A:N.85, A:N.85, A:T.215 Salt bridges: A:R.32, A:K.36 pi-Cation interactions: A:R.32

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: Q.238, G.268, A.269, L.299, T.304 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.238, A:A.269, A:T.304, A:T.304 Water bridges: A:A.269 EDO.3: 6 residues within 4Å: Chain A: R.32, E.56, K.93, D.94, P.98 Ligands: NAP.1 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.32, A:R.32, A:E.56, A:D.94, A:D.94 EDO.4: 4 residues within 4Å: Chain A: Q.34, A.37, L.41, Y.51 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.34 EDO.5: 4 residues within 4Å: Chain A: E.158, N.159, V.161, T.162 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.158, A:N.159 Water bridges: A:H.134

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.6: 2 residues within 4Å: Chain A: W.176, N.260 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.260

1 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.7: 4 residues within 4Å: Chain A: N.136, N.137, H.235, F.236 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:N.136

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, J.Y. et al., Structural Insight into Enantioselective Inversion of an Alcohol Dehydrogenase Reveals a "Polar Gate" in Stereorecognition of Diaryl Ketones. J. Am. Chem. Soc. (2018)

Release Date

2019-01-02

Peptides

Uncharacterized protein ADH: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Uncharacterized protein ADH

Related Entries With Identical Sequence