- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.74 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x HAR: N-OMEGA-HYDROXY-L-ARGININE(Non-covalent)
- 4 x MN: MANGANESE (II) ION(Non-covalent)
MN.2: 6 residues within 4Å:- Chain A: H.114, D.140, D.144, D.241
- Ligands: HAR.1, MN.3
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:H.114, A:D.140, A:D.144, A:D.241
MN.3: 6 residues within 4Å:- Chain A: D.140, H.142, D.241, D.243
- Ligands: HAR.1, MN.2
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:D.140, A:H.142, A:D.241, A:D.243, A:D.243
MN.9: 6 residues within 4Å:- Chain B: H.114, D.140, D.144, D.241
- Ligands: HAR.8, MN.10
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:H.114, B:D.140, B:D.144, B:D.241
MN.10: 6 residues within 4Å:- Chain B: D.140, H.142, D.241, D.243
- Ligands: HAR.8, MN.9
5 PLIP interactions:5 interactions with chain B- Metal complexes: B:D.140, B:H.142, B:D.241, B:D.243, B:D.243
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.4: 2 residues within 4Å:- Chain A: M.17, K.275
1 PLIP interactions:1 interactions with chain A- Water bridges: A:G.274
EDO.5: 3 residues within 4Å:- Chain A: D.207, H.208, F.209
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:H.208, A:H.208
EDO.6: 4 residues within 4Å:- Chain A: Y.101, D.102, V.103, A.127
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:V.103, A:A.127
EDO.7: 5 residues within 4Å:- Chain A: E.74, T.78, A.80, N.82, L.83
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:T.78, A:N.82, A:L.83
- Water bridges: A:N.84, A:E.85
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Malik, A. et al., Structural insights into Entamoeba histolytica arginase and structure-based identification of novel non-amino acid based inhibitors as potential antiamoebic molecules. Febs J. (2019)
- Release Date
- 2019-06-26
- Peptides
- Arginase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.74 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x HAR: N-OMEGA-HYDROXY-L-ARGININE(Non-covalent)
- 4 x MN: MANGANESE (II) ION(Non-covalent)
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Malik, A. et al., Structural insights into Entamoeba histolytica arginase and structure-based identification of novel non-amino acid based inhibitors as potential antiamoebic molecules. Febs J. (2019)
- Release Date
- 2019-06-26
- Peptides
- Arginase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B