SMTL ID : 5zf3.1

Crystal Structures of Endo-beta-1,4-xylanase II Complexed with Xylotriose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

1 x XYP- XYP- XYP: beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose

XYP-XYP-XYP.1: 20 residues within 4Å: Chain A: S.15, W.17, N.43, V.45, Y.72, Y.76, W.78, E.85, Y.87, R.121, Q.124, P.125, S.126, I.127, I.128, G.129, F.133, Q.135, Y.170, E.176 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:W.17

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: N.70, Y.72, Y.95, R.121, E.176, Y.178 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.70, A:Y.72, A:Y.72, A:Y.72 Water bridges: A:N.43, A:R.121

2 x IOD: IODIDE ION(Non-functional Binders)

IOD.3: 3 residues within 4Å: Chain A: R.144, S.145, S.146 Ligand excluded by PLIP IOD.4: 4 residues within 4Å: Chain A: R.118, T.119, Q.120, Y.134 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, X. et al., Crystal Structures of Endo-beta-1,4-xylanase II Complexed with Xylotriose. To be published

Release Date

2019-03-06

Peptides

Endo-1,4-beta-xylanase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Endo-1,4-beta-xylanase 2

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