SMTL ID : 5zis.1

Crystal structure of Mn-ProtoporphyrinIX-reconstituted P450BM3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

homo-tetramer

Ligands

4 x MNH: MANGANESE PROTOPORPHYRIN IX(Non-covalent)

MNH.1: 19 residues within 4Å: Chain A: K.69, L.86, F.87, W.96, A.264, G.265, T.268, T.269, L.272, A.328, F.331, P.392, F.393, G.394, R.398, C.400, G.402, F.405, A.406 14 PLIP interactions: 14 interactions with chain A, Hydrophobic interactions: A:L.86, A:F.87, A:F.87, A:F.87, A:A.264, A:T.268, A:L.272, A:F.393, A:F.393, A:F.405 Salt bridges: A:K.69, A:K.69, A:R.398 Metal complexes: A:C.400 MNH.2: 22 residues within 4Å: Chain B: K.69, L.86, F.87, W.96, I.153, F.261, A.264, G.265, T.268, T.269, L.272, T.327, A.328, F.331, P.392, F.393, G.394, R.398, C.400, I.401, G.402, A.406 13 PLIP interactions: 13 interactions with chain B, Hydrophobic interactions: B:L.86, B:F.87, B:I.153, B:F.261, B:F.261, B:A.264, B:L.272, B:F.331, B:F.393, B:I.401 Salt bridges: B:K.69, B:R.398 Metal complexes: B:C.400 MNH.3: 26 residues within 4Å: Chain C: K.69, L.75, L.86, F.87, W.96, F.107, F.261, A.264, G.265, T.268, T.269, L.272, L.322, T.327, A.328, F.331, P.392, F.393, G.394, R.398, A.399, C.400, I.401, G.402, F.405, A.406 18 PLIP interactions: 18 interactions with chain C, Hydrophobic interactions: C:L.86, C:F.87, C:F.87, C:F.87, C:F.107, C:F.261, C:A.264, C:L.272, C:L.322, C:A.328, C:F.393, C:I.401, C:F.405 Salt bridges: C:K.69, C:K.69, C:R.398 pi-Stacking: C:F.393 Metal complexes: C:C.400 MNH.4: 26 residues within 4Å: Chain D: K.69, L.75, L.86, F.87, W.96, F.107, I.153, F.261, A.264, G.265, T.268, T.269, L.272, L.322, T.327, A.328, F.331, P.392, F.393, G.394, R.398, C.400, I.401, G.402, F.405, A.406 16 PLIP interactions: 16 interactions with chain D, Hydrophobic interactions: D:L.86, D:F.87, D:F.87, D:F.87, D:F.107, D:I.153, D:F.261, D:L.272, D:L.322, D:I.401, D:A.406 Hydrogen bonds: D:R.398 Salt bridges: D:K.69, D:K.69, D:R.398 Metal complexes: D:C.400

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Omura, K. et al., Reconstitution of full-length P450BM3 with an artificial metal complex by utilising the transpeptidase Sortase A. Chem. Commun. (Camb.) (2018)

Release Date

2018-08-15

Peptides

Bifunctional cytochrome P450/NADPH--P450 reductase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Bifunctional cytochrome P450/NADPH--P450 reductase

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