SMTL ID : 5zjm.1 (1 other biounit)

Crystal structure of N-acetylneuraminate lyase from Fusobacterium nucleatum

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.32 Å

Oligo State

homo-tetramer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: N.15, I.20, N.21, E.22, K.23 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.15, A:N.21, A:E.22 EDO.2: 5 residues within 4Å: Chain B: N.15, I.20, N.21, E.22, K.23 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:N.15, B:N.21, B:E.22, B:K.23 EDO.3: 5 residues within 4Å: Chain C: N.15, I.20, N.21, E.22, K.23 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:N.15, C:N.21, C:E.22 EDO.4: 5 residues within 4Å: Chain D: N.15, I.20, N.21, E.22, K.23 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:N.15, D:N.21, D:E.22, D:K.23

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kumar, J.P. et al., Crystal structures and kinetics of N-acetylneuraminate lyase from Fusobacterium nucleatum. Acta Crystallogr F Struct Biol Commun (2018)

Release Date

2019-01-23

Peptides

N-acetylneuraminate lyase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

N-acetylneuraminate lyase

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