SMTL ID : 5zk4.1 (3 other biounits)

The structure of DSZS acyltransferase with carrier protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.03 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: Q.25, Q.74, C.102, L.103, R.127, H.207 Ligands: 9EF.5 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.25, A:Q.25, A:L.103 Salt bridges: A:R.127, A:H.207 SO4.2: 4 residues within 4Å: Chain A: G.247, I.248, R.249, A.250 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.247, A:G.247, A:I.248, A:R.249, A:A.250 Salt bridges: A:R.249 SO4.3: 5 residues within 4Å: Chain A: R.15, H.16, K.18, E.92, A.93 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.15, A:H.16, A:A.93 Water bridges: A:R.15 Salt bridges: A:R.15, A:K.18 SO4.4: 6 residues within 4Å: Chain A: M.32, G.33, L.36, V.80, G.281, H.282 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.33 Water bridges: A:G.283 Salt bridges: A:H.282

1 x 9EF: N-[2-(acetylamino)ethyl]-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide(Non-covalent)

9EF.5: 14 residues within 4Å: Chain A: Q.25, G.26, H.101, C.102, M.139, I.143, N.166, N.168, Q.172, V.174, L.200, H.207, V.285 Ligands: SO4.1 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.25, A:N.166, A:N.168, A:Q.172 Water bridges: A:N.166

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miyanaga, A. et al., Structural basis of protein-protein interactions between a trans-acting acyltransferase and acyl carrier protein in polyketide disorazole biosynthesis. J. Am. Chem. Soc. (2018)

Release Date

2018-06-13

Peptides

DisD protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DisD protein

Related Entries With Identical Sequence