SMTL ID : 5zkz.1

Crystal Structures of Mutant Endo-beta-1,4-xylanase II(Y77F) Complexed with Xylotriose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x XYP- XYP- XYP: beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose

XYP-XYP-XYP.1: 18 residues within 4Å: Chain A: S.15, W.17, N.43, V.45, Y.72, F.76, W.78, E.85, Y.87, R.121, Q.124, P.125, S.126, I.127, F.133, Q.135, Y.170, E.176 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:W.17 Water bridges: A:S.126

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: N.43, N.70, Y.72, Y.95, R.121, E.176, Y.178 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.70, A:N.70, A:Y.72, A:R.121, A:R.121 Water bridges: A:N.43, A:Y.72

3 x IOD: IODIDE ION(Non-functional Binders)

IOD.3: 3 residues within 4Å: Chain A: R.144, S.145, S.146 Ligand excluded by PLIP IOD.4: 4 residues within 4Å: Chain A: R.118, T.119, Q.120, Y.134 Ligand excluded by PLIP IOD.5: 3 residues within 4Å: Chain A: K.55, T.167, M.168 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wan, Q. et al., Crystal Structures of Endo-beta-1,4-xylanase II. to be published

Release Date

2019-04-10

Peptides

Endo-1,4-beta-xylanase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Endo-1,4-beta-xylanase 2

Related Entries With Identical Sequence