SMTL ID : 5zl4.1

Crystal structure of DFA-IIIase from Arthrobacter chlorophenolicus A6 wihout its lid in complex with GF2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-trimer

Ligands

3 x GLC- FRU- FRU: beta-D-fructofuranose-(2-1)-beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose(Non-covalent)

GLC-FRU-FRU.1: 18 residues within 4Å: Chain A: S.82, S.84, I.85, Y.163, E.210, G.232, A.233, F.256, P.257, R.258, F.281, P.308, W.309 Chain C: R.134, D.177, D.199, Q.222, A.223 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.210, A:E.210, A:R.258, A:R.258, A:R.258 Water bridges: A:E.210 GLC-FRU-FRU.2: 18 residues within 4Å: Chain A: R.134, D.177, D.199, Q.222, A.223 Chain B: S.82, S.84, I.85, Y.163, E.210, G.232, A.233, F.256, P.257, R.258, F.281, P.308, W.309 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:E.210, B:R.258, B:R.258, B:R.258 Water bridges: B:Y.163 GLC-FRU-FRU.3: 18 residues within 4Å: Chain B: R.134, D.177, D.199, Q.222, A.223 Chain C: S.82, S.84, I.85, Y.163, E.210, G.232, A.233, F.256, P.257, R.258, F.281, P.308, W.309 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:E.210, C:E.210, C:R.258, C:R.258, C:R.258 Water bridges: C:Y.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yu, S.H. et al., Structural and functional basis of difructose anhydride III hydrolase, which sequentially converts inulin using the same catalytic residue. Acs Catalysis (2018)

Release Date

2018-12-19

Peptides

DFA-IIIase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

DFA-IIIase

Related Entries With Identical Sequence