SMTL ID : 5zlk.1

Mutation in the trinuclear site of CotA-laccase: H493A mutant, PH 8.0

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

4 x CU: COPPER (II) ION(Non-covalent)

CU.1: 5 residues within 4Å: Chain A: H.419, C.492, I.494, H.497, M.502 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.419, A:C.492, A:H.497 CU.2: 5 residues within 4Å: Chain A: H.105, H.107, H.422, H.424 Ligands: CU.3 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.105, A:H.422, H2O.6, H2O.7 CU.3: 6 residues within 4Å: Chain A: H.105, H.155, H.422, H.424, H.491 Ligands: CU.2 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.155, A:H.424, A:H.491, H2O.6, H2O.7 CU.4: 4 residues within 4Å: Chain A: H.105, H.107, W.151, H.153 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.107, A:H.153, H2O.6, H2O.7, H2O.9

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 7 residues within 4Å: Chain A: D.113, D.114, Y.118, A.121, Y.133, K.135, R.487 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.113, A:D.114, A:K.135 Water bridges: A:D.116, A:K.135

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.6: 5 residues within 4Å: Chain A: E.188, Y.189, E.244, Y.250, K.341 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.246, A:E.246 Water bridges: A:K.341 EDO.7: 5 residues within 4Å: Chain A: F.292, S.293, Y.300, P.457, S.459 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.293, A:S.293, A:Y.300 EDO.8: 5 residues within 4Å: Chain A: D.268, A.317, P.328, A.332, N.333 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:P.328 Water bridges: A:N.333 EDO.9: 4 residues within 4Å: Chain A: P.483, Y.484, S.485, D.510 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.485, A:D.510, A:D.510

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xie, T. et al., Structural Insight into the Allosteric Coupling of Cu1 Site and Trinuclear Cu Cluster in CotA Laccase. Chembiochem (2018)

Release Date

2018-05-16

Peptides

Spore coat protein A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Spore coat protein A