SMTL ID : 5zlz.1

Structure of tPA and PAI-1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.58 Å

Oligo State

hetero-1-1-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain B: D.130, W.131, P.162, S.164 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.164, B:S.164 GOL.2: 6 residues within 4Å: Chain B: F.19, E.28, I.61, R.64, V.68, K.76 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.64, B:K.76, B:K.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Min, L. et al., Development of a PAI-1 trapping agent (PAItrap2) based on inactivated tPA-SPD and the crystal structure of PAItrap2 in complex with PAI-1. To Be Published

Release Date

2019-04-03

Peptides

Plasminogen activator inhibitor 1: A
Tissue-type plasminogen activator: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
I

B
E

Plasminogen activator inhibitor 1

Tissue-type plasminogen activator