SMTL ID : 5zmi.1

Crystal structure of APRT from Y. pseudotuberculosis in complex with adenine.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-dimer

Ligands

2 x ADE: ADENINE(Non-covalent)

ADE.1: 7 residues within 4Å: Chain A: L.31, F.32, R.33, L.132, A.134, L.162, L.165 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.31, A:R.33 ADE.3: 7 residues within 4Å: Chain B: L.31, F.32, R.33, L.132, A.134, L.162, L.165 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:L.31, B:R.33

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: T.117, I.120 No protein-ligand interaction detected (PLIP) NA.4: 2 residues within 4Å: Chain B: T.117, I.120 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:I.120

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pavithra, G.C. et al., Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis. To be published

Release Date

2019-04-10

Peptides

Adenine phosphoribosyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Adenine phosphoribosyltransferase

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