SMTL ID : 5zn7.1 (1 other biounit)

Crystal structure of GH31 alpha-xylosidase from a soil metagenome complexed with xylose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-tetramer

Ligands

2 x XYS: alpha-D-xylopyranose(Non-covalent)

XYS.1: 12 residues within 4Å: Chain A: L.252, D.280, F.281, W.319, W.386, D.388, E.389, R.441, W.455, D.458, F.491, H.521 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.388, A:R.441, A:D.458, A:D.458, A:H.521 Water bridges: A:D.388 Salt bridges: A:R.441 XYS.2: 12 residues within 4Å: Chain C: L.252, D.280, F.281, W.319, W.386, D.388, E.389, R.441, W.455, D.458, F.491, H.521 7 PLIP interactions: 7 interactions with chain C Hydrogen bonds: C:D.388, C:R.441, C:D.458, C:D.458, C:H.521 Water bridges: C:D.388 Salt bridges: C:R.441

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Matsuzawa, T. et al., Structural insight into substrate specificity of alpha-xylosidase from a soil metagenome. To Be Published

Release Date

2019-04-10

Peptides

alpha-xylosidase MeXyl31: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
G

alpha-xylosidase MeXyl31

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