SMTL ID : 5zod.1

Crystal Structure of hFen1 in apo form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: S.36, E.160 No protein-ligand interaction detected (PLIP) MG.2: 6 residues within 4Å: Chain A: E.158, E.160, D.179, D.181, D.233, Y.234 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.160, A:D.179, A:D.181, A:D.233, A:Y.234

4 x K: POTASSIUM ION(Non-covalent)

K.3: 5 residues within 4Å: Chain A: A.17, R.19, E.206, F.207, H.208 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.206, A:H.208, H2O.2 K.4: 3 residues within 4Å: Chain A: N.219, Q.220, E.221 No protein-ligand interaction detected (PLIP) K.5: 4 residues within 4Å: Chain A: D.225, E.257, H.276, H.280 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.225, A:H.276, H2O.4 K.6: 4 residues within 4Å: Chain A: V.288, L.289, D.290, P.291 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:L.289, H2O.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, H. et al., Structural basis of 5' flap recognition and protein-protein interactions of human flap endonuclease 1. Nucleic Acids Res. (2018)

Release Date

2019-01-30

Peptides

Flap endonuclease 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Flap endonuclease 1