SMTL ID : 5zss.1

L-Cysteine-PLP reaction intermediate of NifS from Hydrogenimonas thermophila

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.17 Å

Oligo State

homo-dimer

Ligands

1 x C6P: N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-L-CYSTEINE(Non-covalent)

C6P.1: 17 residues within 4Å: Chain A: N.11, A.12, C.73, A.74, T.75, H.105, M.152, N.156, D.181, V.183, Q.184, S.204, H.206, K.207, R.355 Chain B: G.241, T.242 12 PLIP interactions: 11 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:A.74, A:T.75, A:T.75, A:N.156, A:Q.184, A:S.204, A:K.207, B:T.242 Salt bridges: A:H.206, A:K.207, A:R.355 pi-Stacking: A:H.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nakamura, R. et al., X-ray snapshots of two classes of cysteine desulfurase enzymes NifS and SufS. to be published

Release Date

2019-05-01

Peptides

Cysteine desulfurase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cysteine desulfurase

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