SMTL ID : 5ztn.1

The crystal structure of human DYRK2 in complex with Curcumin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x CUR: (1Z,4Z,6E)-5-hydroxy-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,4,6-trien-3-one(Non-covalent)

CUR.1: 18 residues within 4Å: Chain A: K.103, I.105, F.110, V.113, A.126, K.128, E.143, I.162, F.178, E.179, L.180, L.181, S.182, L.232, I.244, D.245, F.246, G.247 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:I.105, A:A.126, A:I.162, A:I.162, A:F.178, A:L.180, A:L.181, A:L.232, A:I.244, A:I.244 Hydrogen bonds: A:K.128, A:K.128, A:D.245, A:F.246, A:G.247 CUR.2: 18 residues within 4Å: Chain B: K.103, I.105, F.110, V.113, A.126, K.128, E.143, I.162, F.178, E.179, L.180, L.181, S.182, L.232, I.244, D.245, F.246, G.247 17 PLIP interactions: 17 interactions with chain B Hydrophobic interactions: B:A.126, B:I.162, B:I.162, B:F.178, B:F.178, B:L.180, B:L.181, B:L.232, B:I.244, B:I.244 Hydrogen bonds: B:K.103, B:K.128, B:K.128, B:D.245, B:D.245, B:F.246, B:G.247

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Banerjee, S. et al., Ancient drug curcumin impedes 26S proteasome activity by direct inhibition of dual-specificity tyrosine-regulated kinase 2. Proc. Natl. Acad. Sci. U.S.A. (2018)

Release Date

2018-07-18

Peptides

Dual specificity tyrosine-phosphorylation-regulated kinase 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Dual specificity tyrosine-phosphorylation-regulated kinase 2

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