SMTL ID : 5zvx.1

Crystal structure of K86A mutant of phosphomannose isomerase from Salmonella typhimurium

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: Q.99, H.101, E.136, H.257, Y.259 Ligands: EDO.7 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.101, A:E.136, A:E.136, A:H.257, H2O.1

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 7 residues within 4Å: Chain A: F.139, A.140, L.141, P.245, G.246, E.349, R.385 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.385, A:R.385 Water bridges: A:L.141 EDO.3: 4 residues within 4Å: Chain A: L.304, T.305, A.306, P.307 No protein-ligand interaction detected (PLIP) EDO.4: 2 residues within 4Å: Chain A: Y.13, W.15 No protein-ligand interaction detected (PLIP) EDO.5: 4 residues within 4Å: Chain A: H.133, V.320, D.321, D.322 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.321 EDO.6: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) EDO.7: 7 residues within 4Å: Chain A: L.96, S.97, Q.99, H.257, A.258, Y.259 Ligands: ZN.1 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:L.96, A:Y.259 Water bridges: A:Q.99, A:Q.99, A:E.136, A:E.136, A:E.266

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bangera, M. et al., Structural and functional insights into phosphomannose isomerase: the role of zinc and catalytic residues. Acta Crystallogr D Struct Biol (2019)

Release Date

2019-05-01

Peptides

Mannose-6-phosphate isomerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mannose-6-phosphate isomerase