SMTL ID : 5zze.1

Crystal structure of horse myoglobin crystallized by ammonium sulfate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.42 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 18 residues within 4Å: Chain A: T.39, K.42, F.43, K.45, H.64, V.67, V.68, A.71, L.72, L.89, S.92, H.93, H.97, I.99, Y.103, L.104, I.107, F.138 20 PLIP interactions: 19 interactions with chain A, 1 Ligand-Water interactions Hydrophobic interactions: A:T.39, A:F.43, A:F.43, A:V.67, A:V.68, A:L.89, A:L.89, A:I.99, A:Y.103, A:I.107, A:F.138, A:F.138 Hydrogen bonds: A:S.92 Water bridges: A:K.45 Salt bridges: A:K.45, A:H.93, A:H.97 pi-Stacking: A:H.97 Metal complexes: A:H.93, H2O.3

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: A.57, S.58, E.59, D.60 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.59, A:D.60 Water bridges: A:H.48 SO4.3: 3 residues within 4Å: Chain A: H.81, H.82, E.83 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.83 Water bridges: A:A.84 SO4.4: 4 residues within 4Å: Chain A: A.22, K.62, K.63, T.66 1 PLIP interactions: 1 interactions with chain A Water bridges: A:A.22

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kitahara, M. et al., Anisotropic Distribution of Ammonium Sulfate Ions in Protein Crystallization. Cryst.Growth Des. (2019)

Release Date

2019-02-20

Peptides

Myoglobin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Myoglobin

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