SMTL ID : 6a0z.1

Crystal structure of broadly neutralizing antibody 13D4 bound to H5N1 influenza hemagglutinin, HA head region

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.33 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: S.124, S.125, N.155 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.155 NAG.2: 3 residues within 4Å: Chain A: N.166, N.237, A.239 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:A.239 Hydrogen bonds: A:N.166, A:N.237

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, Q. et al., Structural Basis for the Broad, Antibody-Mediated Neutralization of H5N1 Influenza Virus. J. Virol. (2018)

Release Date

2018-06-20

Peptides

Hemagglutinin,Envelope glycoprotein: A
Antibody 13D4, Fab Heavy Chain: B
Antibody 13D4, Fab Light Chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
H

C
L

Hemagglutinin,Envelope glycoprotein

Antibody 13D4, Fab Heavy Chain

Antibody 13D4, Fab Light Chain

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