- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- monomer
- Ligands
- 1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- 1 x CU: COPPER (II) ION(Non-covalent)
- 3 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 5 residues within 4Å:- Chain A: T.33, K.34, T.35, R.189, H.190
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:K.34, A:T.35
- Salt bridges: A:R.189, A:H.190
SO4.4: 6 residues within 4Å:- Chain A: G.164, K.165, K.166, M.167, H.239, Y.244
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:G.164, A:G.164, A:K.166, A:M.167
- Salt bridges: A:K.166, A:H.239
SO4.5: 3 residues within 4Å:- Chain A: E.4, D.5, N.8
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:E.4, A:D.5, A:N.8
- 21 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)(Non-functional Binders)
OLC.6: 13 residues within 4Å:- Chain A: R.93, E.94, F.97, L.98, M.101, I.176, Y.179, F.292, C.296, L.299, L.300
- Ligands: OLC.10, OLC.18
Ligand excluded by PLIPOLC.7: 8 residues within 4Å:- Chain A: L.157, K.248, Q.249, W.252, G.253, Y.297
- Ligands: OLC.19, OLC.26
Ligand excluded by PLIPOLC.8: 10 residues within 4Å:- Chain A: V.16, T.19, T.144, L.145, F.148, E.149, K.152, T.156
- Ligands: OLC.12, OLC.19
Ligand excluded by PLIPOLC.9: 4 residues within 4Å:- Chain A: P.201, R.223, L.227
- Ligands: HEM.1
Ligand excluded by PLIPOLC.10: 7 residues within 4Å:- Chain A: T.96, F.97, I.100, M.101, I.104, F.105
- Ligands: OLC.6
Ligand excluded by PLIPOLC.11: 7 residues within 4Å:- Chain A: K.165, Q.168, F.169, G.173, W.232, V.235
- Ligands: OLC.16
Ligand excluded by PLIPOLC.12: 5 residues within 4Å:- Chain A: K.12, V.16, F.148, K.152
- Ligands: OLC.8
Ligand excluded by PLIPOLC.13: 2 residues within 4Å:- Chain A: I.234
- Ligands: OLC.20
Ligand excluded by PLIPOLC.14: 7 residues within 4Å:- Chain A: I.241, K.245, F.251, I.255, L.258, I.259, T.262
Ligand excluded by PLIPOLC.15: 9 residues within 4Å:- Chain A: F.20, L.23, A.277, G.279, F.280, L.282, A.283, F.286
- Ligands: OLC.22
Ligand excluded by PLIPOLC.16: 2 residues within 4Å:- Ligands: OLC.11, OLC.17
Ligand excluded by PLIPOLC.17: 7 residues within 4Å:- Chain A: I.172, I.176, L.299, A.303, R.306
- Ligands: OLC.16, OLC.18
Ligand excluded by PLIPOLC.18: 7 residues within 4Å:- Chain A: F.97, M.101, I.135, Y.179, L.299
- Ligands: OLC.6, OLC.17
Ligand excluded by PLIPOLC.19: 8 residues within 4Å:- Chain A: L.23, F.137, L.141, C.290, V.294
- Ligands: OLC.7, OLC.8, OLC.26
Ligand excluded by PLIPOLC.20: 3 residues within 4Å:- Chain A: V.231
- Ligands: OLC.13, OLC.21
Ligand excluded by PLIPOLC.21: 8 residues within 4Å:- Chain A: K.166, H.170, V.235, V.238, H.239, T.242, S.243
- Ligands: OLC.20
Ligand excluded by PLIPOLC.22: 6 residues within 4Å:- Chain A: M.270, Y.273, S.274, F.280
- Ligands: OLC.15, OLC.23
Ligand excluded by PLIPOLC.23: 2 residues within 4Å:- Chain A: Y.273
- Ligands: OLC.22
Ligand excluded by PLIPOLC.24: 5 residues within 4Å:- Chain A: T.212, F.214, W.217, G.221
- Ligands: OLC.25
Ligand excluded by PLIPOLC.25: 5 residues within 4Å:- Chain A: L.210, P.211, T.212, W.217
- Ligands: OLC.24
Ligand excluded by PLIPOLC.26: 6 residues within 4Å:- Chain A: K.248, W.252, I.259, F.260
- Ligands: OLC.7, OLC.19
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Niwa, S. et al., Crystal structure of heme A synthase fromBacillus subtilis. Proc. Natl. Acad. Sci. U.S.A. (2018)
- Release Date
- 2018-11-21
- Peptides
- Heme A synthase: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- monomer
- Ligands
- 1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- 1 x CU: COPPER (II) ION(Non-covalent)
- 3 x SO4: SULFATE ION(Non-functional Binders)
- 21 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Niwa, S. et al., Crystal structure of heme A synthase fromBacillus subtilis. Proc. Natl. Acad. Sci. U.S.A. (2018)
- Release Date
- 2018-11-21
- Peptides
- Heme A synthase: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A - Membrane
-
We predict this structure to be a membrane protein.