- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.09 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
- 5 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 10 residues within 4Å:- Chain A: N.63, I.64, H.65, R.66, G.263, E.264, G.286, T.287
- Chain B: C.376
- Ligands: CIT.14
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:I.64, A:R.66, A:E.264
- Water bridges: A:G.286, A:T.287, A:Q.288
GOL.5: 3 residues within 4Å:- Chain A: L.19, N.20, K.26
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.20, A:K.26
GOL.7: 8 residues within 4Å:- Chain A: R.199, K.203, N.204, A.205, T.206, D.228, K.249, L.252
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:R.199, A:R.199, A:K.203, A:T.206, A:K.249
GOL.10: 4 residues within 4Å:- Chain A: D.357, H.360, W.423, F.424
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.357, A:D.357, A:W.423
GOL.18: 5 residues within 4Å:- Chain B: H.354, P.355, H.356, P.393, S.395
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:H.354, B:H.356, B:H.356, B:P.393, B:S.395
- 3 x CIT: CITRIC ACID(Non-functional Binders)
CIT.3: 12 residues within 4Å:- Chain A: A.40, A.41, H.133, N.187, K.236, R.371, H.375, C.376, R.398
- Chain B: N.63, T.287
- Ligands: PLP.1
15 PLIP interactions:13 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:A.41, A:N.187, A:K.236, B:N.63, B:T.287
- Water bridges: A:T.104, A:R.371, A:R.371, A:R.371
- Salt bridges: A:H.133, A:H.235, A:K.236, A:K.236, A:R.371, A:R.398
CIT.6: 6 residues within 4Å:- Chain A: H.65, R.66, T.76, E.264, N.277, Y.281
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:Y.281
- Hydrogen bonds: A:R.66, A:N.277
- Water bridges: A:H.65
- Salt bridges: A:H.65, A:H.65
CIT.14: 13 residues within 4Å:- Chain A: N.63, I.64, H.65, R.66
- Chain B: A.41, H.133, N.187, R.371, H.375, C.376, R.398
- Ligands: GOL.2, PLP.13
16 PLIP interactions:5 interactions with chain A, 11 interactions with chain B- Hydrogen bonds: A:N.63, A:R.66, A:R.66, B:A.40, B:N.187
- Water bridges: A:T.287, B:H.375, B:H.375, B:R.398, B:R.398
- Salt bridges: A:R.66, B:H.133, B:K.236, B:R.371, B:H.375, B:R.398
- 8 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
PEG.4: 3 residues within 4Å:- Chain A: D.21, Y.302, S.305
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:S.305
- Water bridges: A:S.48, A:Y.302
PEG.8: 4 residues within 4Å:- Chain A: V.353, H.354, D.391, P.393
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:V.353
- Water bridges: A:G.352, A:H.354
PEG.9: 6 residues within 4Å:- Chain A: A.115, K.116, Y.147
- Chain B: F.146, Y.147
- Ligands: PEG.15
3 PLIP interactions:1 interactions with chain A, 2 interactions with chain B- Water bridges: A:Y.147, B:Y.147
- Hydrogen bonds: B:Y.147
PEG.11: 5 residues within 4Å:- Chain A: K.219, G.307, F.308, E.309, K.310
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:F.308, A:E.309, A:K.310
PEG.12: 1 residues within 4Å:- Chain A: V.77
No protein-ligand interaction detected (PLIP)PEG.15: 3 residues within 4Å:- Chain B: K.145, F.146
- Ligands: PEG.9
1 PLIP interactions:1 interactions with chain B- Water bridges: B:R.142
PEG.16: 4 residues within 4Å:- Chain A: V.151, Y.153
- Chain B: F.271, E.272
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain B- Water bridges: A:V.151
- Hydrogen bonds: B:E.272
PEG.17: 4 residues within 4Å:- Chain B: T.155, K.169, S.173, I.174
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:T.155, B:K.169, B:T.170
- Water bridges: B:Y.153, B:Y.153, B:T.155, B:S.166, B:T.170
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jin, H.S. et al., The sulfur formation system mediating extracellular cysteine-cystine recycling in Fervidobacterium islandicum AW-1 is associated with keratin degradation. Microb Biotechnol (2020)
- Release Date
- 2019-10-09
- Peptides
- Cysteine desulfurase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.09 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
- 5 x GOL: GLYCEROL(Non-functional Binders)
- 3 x CIT: CITRIC ACID(Non-functional Binders)
- 8 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jin, H.S. et al., The sulfur formation system mediating extracellular cysteine-cystine recycling in Fervidobacterium islandicum AW-1 is associated with keratin degradation. Microb Biotechnol (2020)
- Release Date
- 2019-10-09
- Peptides
- Cysteine desulfurase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B