SMTL ID : 6a6k.1 (2 other biounits)

Crystal structure of Estrogen-related Receptor-3 (ERR-gamma) ligand binding domain with DN201000

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

monomer

Ligands

1 x 9S6: 3-[(~{E})-5-oxidanyl-2-phenyl-1-[4-(4-propan-2-ylpiperazin-1-yl)phenyl]pent-1-enyl]phenol(Non-covalent)

9S6.1: 27 residues within 4Å: Chain A: L.45, L.48, C.49, L.51, A.52, D.53, L.56, W.85, M.86, L.89, I.90, V.93, L.104, Y.106, L.122, L.125, N.126, I.129, A.211, H.214, F.215, I.218, L.220, E.221, G.222, M.226, L.229 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.45, A:A.52, A:W.85, A:L.89, A:L.89, A:V.93, A:L.122, A:F.215, A:I.218, A:L.220, A:L.229 Hydrogen bonds: A:Y.106 Salt bridges: A:D.53 pi-Stacking: A:Y.106

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, J. et al., Discovery of Potent, Selective, and Orally Bioavailable Estrogen-Related Receptor-gamma Inverse Agonists To Restore the Sodium Iodide Symporter Function in Anaplastic Thyroid Cancer. J. Med. Chem. (2019)

Release Date

2019-04-10

Peptides

Estrogen-related receptor gamma: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Estrogen-related receptor gamma

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