SMTL ID : 6a94.2 (1 other biounit)

Crystal structure of 5-HT2AR in complex with zotepine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

monomer

Ligands

1 x ZOT: 2-(3-chloranylbenzo[b][1]benzothiepin-5-yl)oxy-N,N-dimethyl-ethanamine(Non-covalent)

ZOT.1: 13 residues within 4Å: Chain A: D.89, V.90, S.93, T.94, L.163, V.169, G.172, S.176, F.305, W.309, F.312, F.313, V.339 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.305, A:W.309, A:F.313 Salt bridges: A:D.89 pi-Stacking: A:W.309, A:W.309

1 x PLM: PALMITIC ACID(Covalent)

PLM.2: 5 residues within 4Å: Chain A: I.368, Q.369, C.370 Ligands: CLR.3, A6L.4 No protein-ligand interaction detected (PLIP)

1 x CLR: CHOLESTEROL(Non-covalent)

CLR.3: 7 residues within 4Å: Chain A: I.20, I.23, L.28, Y.367, Y.372 Ligands: PLM.2, A6L.4 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.20, A:I.20, A:I.23, A:L.28 Hydrogen bonds: A:Y.367, A:Y.372

1 x A6L: 2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)

A6L.4: 3 residues within 4Å: Chain A: Y.372 Ligands: PLM.2, CLR.3 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.372, A:Y.372, A:Y.372, A:Y.372

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kimura, K.T. et al., Structures of the 5-HT2Areceptor in complex with the antipsychotics risperidone and zotepine. Nat.Struct.Mol.Biol. (2019)

Release Date

2019-02-13

Peptides

5-hydroxytryptamine receptor 2A,Soluble cytochrome b562: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Membrane

We predict this structure to be a membrane protein.
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5-hydroxytryptamine receptor 2A,Soluble cytochrome b562

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