SMTL ID : 6aah.1

Crystal structure of JAK1 in complex with peficitinib

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.83 Å

Oligo State

homo-dimer

Ligands

2 x 9T6: 4-[[(1S,3R)-5-oxidanyl-2-adamantyl]amino]-1H-pyrrolo[2,3-b]pyridine-5-carboxamide(Non-covalent)

9T6.1: 15 residues within 4Å: Chain A: L.17, G.18, V.25, A.42, V.74, M.92, E.93, F.94, L.95, G.98, R.143, N.144, L.146, G.156, D.157 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:L.17, A:V.25, A:A.42, A:L.146, A:L.146, A:D.157 Hydrogen bonds: A:E.93, A:L.95, A:L.95, A:R.143, A:R.143, A:N.144 Water bridges: A:R.15, A:S.99, A:S.99 9T6.2: 14 residues within 4Å: Chain B: L.17, V.25, A.42, M.92, E.93, F.94, L.95, G.98, S.99, R.143, N.144, L.146, G.156, D.157 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:L.17, B:V.25, B:V.25, B:V.25, B:L.146, B:L.146, B:D.157 Hydrogen bonds: B:E.93, B:L.95, B:L.95, B:N.144 Water bridges: B:S.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hamaguchi, H. et al., Discovery and structural characterization of peficitinib (ASP015K) as a novel and potent JAK inhibitor. Bioorg. Med. Chem. (2018)

Release Date

2018-08-15

Peptides

Tyrosine-protein kinase JAK1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Tyrosine-protein kinase JAK1

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