SMTL ID : 6adw.1

Crystal structure of the Zika virus NS3 helicase (apo form)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: V.197, S.218, R.219, T.240 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.219 Water bridges: A:R.219, A:D.241, A:D.241 Salt bridges: A:R.219 SO4.2: 5 residues within 4Å: Chain A: R.57, T.76, T.77, C.93, T.96 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.77, A:T.96 SO4.3: 2 residues within 4Å: Chain A: D.433, H.434 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.434 Water bridges: A:N.201, A:S.432

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.4: 11 residues within 4Å: Chain A: P.27, G.28, A.29, G.30, K.31, T.32, R.33, E.117, A.148, R.290, R.293 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:G.28, A:G.30, A:K.31, A:R.33, A:A.148, A:R.293 Water bridges: A:H.26, A:N.248, A:R.290, A:R.290 Salt bridges: A:K.31, A:R.290, A:R.293

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fang, J. et al., Crystallographic Snapshots of the Zika Virus NS3 Helicase Help Visualize the Reactant Water Replenishment. ACS Infect Dis (2019)

Release Date

2019-03-13

Peptides

Serine protease NS3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine protease NS3

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