SMTL ID : 6adx.1

Crystal structure of the Zika virus NS3 helicase (ADP-Mn2+ complex, form 1)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 11 residues within 4Å: Chain A: H.26, P.27, G.28, A.29, G.30, K.31, T.32, R.33, N.161, R.293 Ligands: MN.2 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:G.28, A:G.28, A:G.30, A:K.31, A:T.32, A:R.33, A:R.33, A:N.161, A:R.293 Water bridges: A:N.248, A:R.293, A:R.293 Salt bridges: A:K.31, A:R.293, A:R.293 pi-Cation interactions: A:R.33, A:R.33

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.2: 4 residues within 4Å: Chain A: T.32, D.116, E.117 Ligands: ADP.1 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:T.32, A:E.117, H2O.1, H2O.1, H2O.5

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fang, J. et al., Crystallographic Snapshots of the Zika Virus NS3 Helicase Help Visualize the Reactant Water Replenishment. ACS Infect Dis (2019)

Release Date

2019-03-13

Peptides

Serine protease NS3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine protease NS3

Related Entries With Identical Sequence