SMTL ID : 6ae6.1 (1 other biounit)

Crystals structure of Classical swine fever virus NS5B (residues 1-672, Y471A mutant, form 2)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.86 Å

Oligo State

monomer

Ligands

3 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 3 residues within 4Å: Chain A: F.337, R.440, K.443 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.443 ACT.2: 5 residues within 4Å: Chain A: T.182, P.183, G.184, L.185, H.186 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:H.186 Hydrogen bonds: A:G.184, A:L.185, A:H.186 Salt bridges: A:H.186 ACT.3: 4 residues within 4Å: Chain A: R.561, L.603, R.605, T.606 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.561

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, W. et al., A unique intra-molecular fidelity-modulating mechanism identified in a viral RNA-dependent RNA polymerase. Nucleic Acids Res. (2018)

Release Date

2018-09-19

Peptides

RdRp catalytic: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RdRp catalytic

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