SMTL ID : 6aip.1

Cab2 mutant-H337A complex with phosphopantothenoylcystine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

homo-dimer

Ligands

2 x 9Z6: (5R,12R,17R)-17-amino-12-carboxy-1,1,5-trihydroxy-4,4-dimethyl-6,10-dioxo-2-oxa-14,15-dithia-7,11-diaza-1-phosphaoctadecan-18-oic acid 1-oxide (non-preferred name)(Non-covalent)

9Z6.1: 20 residues within 4Å: Chain A: S.105, A.106, G.107, T.108, R.109, A.215, A.216, A.217, V.218, D.220, K.268, F.269, L.270, F.286, K.287, L.288, Y.306, N.314, R.319 Chain B: K.232 29 PLIP interactions: 26 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:L.288, A:L.288 Hydrogen bonds: A:A.106, A:G.107, A:T.108, A:R.109, A:R.109, A:A.215, A:V.218, A:F.269, A:L.270, A:F.286, A:N.314 Water bridges: A:S.86, A:G.87, A:S.105, A:G.107, A:K.287, A:K.287, A:K.287, A:K.287, A:Y.306, A:R.319, A:R.319, B:K.232, B:K.232 Salt bridges: A:K.287, A:R.319, B:K.232 9Z6.2: 20 residues within 4Å: Chain A: K.232 Chain B: S.105, A.106, G.107, T.108, R.109, A.215, A.216, A.217, V.218, P.267, K.268, F.269, L.270, F.286, K.287, L.288, Y.306, N.314, R.319 26 PLIP interactions: 25 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:L.288, B:L.288 Hydrogen bonds: B:A.106, B:G.107, B:T.108, B:R.109, B:R.109, B:A.215, B:V.218, B:F.269, B:L.270, B:F.286, B:Y.306, B:Y.306, B:N.314 Water bridges: B:S.86, B:G.87, B:S.105, B:G.107, B:K.287, B:L.288, B:R.319, B:R.319 Salt bridges: B:K.287, B:R.319, A:K.232

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zheng, P. et al., Crystallographic Analysis of the Catalytic Mechanism of Phosphopantothenoylcysteine Synthetase from Saccharomyces cerevisiae. J. Mol. Biol. (2019)

Release Date

2019-03-20

Peptides

Phosphopantothenate--cysteine ligase CAB2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Phosphopantothenate--cysteine ligase CAB2

Related Entries With Identical Sequence