SMTL ID : 6ank.1 (1 other biounit)

Synaptotagmin-7, C2A- and C2B-domains

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: L.157, A.282, W.284 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:W.284 EDO.2: 1 residues within 4Å: Chain A: E.230 No protein-ligand interaction detected (PLIP)

4 x CA: CALCIUM ION(Non-covalent)

CA.3: 6 residues within 4Å: Chain A: D.52, D.58, D.111, Y.112, D.113 Ligands: CA.4 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.52, A:D.52, A:D.111, A:Y.112, A:D.113 CA.4: 6 residues within 4Å: Chain A: K.51, D.52, D.111, D.113, D.119 Ligands: CA.3 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:K.51, A:D.52, A:D.111, A:D.113, A:D.119 CA.5: 5 residues within 4Å: Chain A: D.183, D.189, D.243, K.244, D.245 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.189, A:D.243, A:K.244, A:D.245, H2O.2 CA.6: 5 residues within 4Å: Chain A: M.182, D.183, D.243, D.245, D.251 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:M.182, A:D.183, A:D.243, A:D.251, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Voleti, R. et al., Exceptionally tight membrane-binding may explain the key role of the synaptotagmin-7 C2A domain in asynchronous neurotransmitter release. Proc. Natl. Acad. Sci. U.S.A. (2017)

Release Date

2017-09-20

Peptides

Synaptotagmin-7: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Synaptotagmin-7

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